Acknowledgement

CafeMol is based on an earlier CG protein simulator CaFold developed for Go-model folding and functional simulation mostly coded by Nobuyasu Koga.

CafeMol contains a set of IO utility subroutines, UTILKOTO, coded by Shigeru Obara.

CafeMol development has been supported by Research and Development of the Next-Generation Integrated Simulation of Living Matter, a part of the Development and Use of the Next-Generation Supercomputer Project of the Ministry of Education, Culture, Sports, Science and Technology, Japan.